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RPRD2 regulation of nuclear pre-mRNA domain containing 2 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102379314, updated on 10-Mar-2024

Summary

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Gene symbol
RPRD2
Gene description
regulation of nuclear pre-mRNA domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842996.1 (246028..265294)

NW_005842996.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S21 Neighboring gene pre-mRNA processing factor 3 Neighboring gene threonyl-tRNA synthetase 2, mitochondrial Neighboring gene ADAMTS like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842996 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, holoenzyme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulation of nuclear pre-mRNA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842996.1 Reference ASM45574v1 Primary Assembly

    Range
    246028..265294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025193008.1 → XP_025048793.1  regulation of nuclear pre-mRNA domain-containing protein 2

    UniProtKB/TrEMBL
    A0A3Q0FSY0
    Conserved Domains (1) summary
    cl02544
    Location:5 → 103
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
Nucleotide Protein
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