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ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102379049, updated on 10-Mar-2024

Summary

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Gene symbol
ATP6V1C1
Gene description
ATPase H+ transporting V1 subunit C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842317.1 (868643..902410)

NW_005842317.1Genomic Context describing neighboring genes Neighboring gene antizyme inhibitor 1 Neighboring gene uncharacterized LOC106722452 Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene uncharacterized LOC102379696 Neighboring gene frizzled class receptor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842317 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842317.1 Reference ASM45574v1 Primary Assembly

    Range
    868643..902410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006028517.2 → XP_006028579.1  V-type proton ATPase subunit C 1

    See identical proteins and their annotated locations for XP_006028579.1

    UniProtKB/TrEMBL
    A0A1U7S3H1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

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