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TMEM220 transmembrane protein 220 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102379002, updated on 10-Mar-2024

Summary

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Gene symbol
TMEM220
Gene description
transmembrane protein 220
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005843102.1 (98339..147121, complement)

NW_005843102.1Genomic Context describing neighboring genes Neighboring gene protein SCO1 homolog, mitochondrial Neighboring gene ADP-ribose/CDP-alcohol diphosphatase, manganese dependent Neighboring gene mitogen-activated protein kinase kinase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005843102 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 220

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005843102.1 Reference ASM45574v1 Primary Assembly

    Range
    98339..147121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025193799.1 → XP_025049584.1  transmembrane protein 220 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0FQJ6
    Conserved Domains (1) summary
    pfam15071
    Location:23 → 111
    TMEM220; Transmembrane family 220, helix

  2. XM_025193801.1 → XP_025049586.1  transmembrane protein 220 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0FPK2
    Conserved Domains (1) summary
    pfam15071
    Location:19 → 95
    TMEM220; Transmembrane family 220, helix

  3. XM_014526655.1 → XP_014382141.1  transmembrane protein 220 isoform X4

    UniProtKB/TrEMBL
    A0A1U8DP78
    Conserved Domains (1) summary
    pfam15071
    Location:4 → 80
    TMEM220; Transmembrane family 220, helix

  4. XM_025193800.1 → XP_025049585.1  transmembrane protein 220 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0FTW3
    Conserved Domains (1) summary
    pfam15071
    Location:21 → 97
    TMEM220; Transmembrane family 220, helix
Nucleotide Protein
Heading Accession and Version

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