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PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102378639, updated on 10-Mar-2024

Summary

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Gene symbol
PHLPP1
Gene description
PH domain and leucine rich repeat protein phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842620.1 (699926..810913)

NW_005842620.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor, X-box binding 1 Neighboring gene zinc finger CCHC-type containing 2 Neighboring gene MARVEL domain-containing protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842620 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH domain leucine-rich repeat-containing protein phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842620.1 Reference ASM45574v1 Primary Assembly

    Range
    699926..810913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025215089.1 → XP_025070874.1  PH domain leucine-rich repeat-containing protein phosphatase 1

    UniProtKB/TrEMBL
    A0A3Q0HG12
    Conserved Domains (4) summary
    smart00332
    Location:627 → 879
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain
    sd00033
    Location:292 → 312
    LRR_RI; leucine-rich repeat [structural motif]
    cl17171
    Location:1 → 90
    PH-like; Pleckstrin homology-like domain
    cl26793
    Location:98 → 585
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
Nucleotide Protein
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