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LARS1 leucyl-tRNA synthetase 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102375967, updated on 10-Mar-2024

Summary

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Gene symbol
LARS1
Gene description
leucyl-tRNA synthetase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
LARS
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842293.1 (753685..798915)

NW_005842293.1Genomic Context describing neighboring genes Neighboring gene POU class 4 homeobox 3 Neighboring gene RNA binding motif protein 27 Neighboring gene SH3 domain containing ring finger 2 Neighboring gene PLAC8 like 1 Neighboring gene glutaredoxin and cysteine rich domain containing 2 Neighboring gene PRELI domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842293 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables leucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842293.1 Reference ASM45574v1 Primary Assembly

    Range
    753685..798915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006028170.2 → XP_006028232.1  leucine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A1U7S2S6
    Conserved Domains (5) summary
    cd07959
    Location:756 → 875
    Anticodon_Ia_Leu_AEc; Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases
    cd00812
    Location:526 → 758
    LeuRS_core; catalytic core domain of leucyl-tRNA synthetases
    PLN02959
    Location:5 → 1071
    PLN02959; aminoacyl-tRNA ligase
    cl00015
    Location:45 → 230
    nt_trans; nucleotidyl transferase superfamily
    cl12020
    Location:857 → 899
    Anticodon_Ia_like; Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains
Nucleotide Protein
Heading Accession and Version

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