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SPAG9 sperm associated antigen 9 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102373972, updated on 10-Mar-2024

Summary

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Gene symbol
SPAG9
Gene description
sperm associated antigen 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841938.1 (1170632..1263110, complement)

NW_005841938.1Genomic Context describing neighboring genes Neighboring gene transducer of ERBB2, 1 Neighboring gene uncharacterized LOC112549604 Neighboring gene nucleoside diphosphate kinase A Neighboring gene nucleoside diphosphate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841938 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables JUN kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP-kinase scaffold activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinesin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor complex adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-Jun-amino-terminal kinase-interacting protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841938.1 Reference ASM45574v1 Primary Assembly

    Range
    1170632..1263110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025199165.1 → XP_025054950.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0G925
    Conserved Domains (1) summary
    pfam16471
    Location:229 → 283
    JIP_LZII; JNK-interacting protein leucine zipper II

  2. XM_025199168.1 → XP_025054953.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A3Q0G9X4
    Conserved Domains (1) summary
    pfam16471
    Location:251 → 305
    JIP_LZII; JNK-interacting protein leucine zipper II

  3. XM_025199167.1 → XP_025054952.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0G676
    Conserved Domains (1) summary
    pfam16471
    Location:251 → 305
    JIP_LZII; JNK-interacting protein leucine zipper II

  4. XM_025199166.1 → XP_025054951.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0G5K0
    Conserved Domains (1) summary
    pfam16471
    Location:251 → 305
    JIP_LZII; JNK-interacting protein leucine zipper II

  5. XM_025199164.1 → XP_025054949.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0G5J9
    Conserved Domains (1) summary
    pfam16471
    Location:251 → 305
    JIP_LZII; JNK-interacting protein leucine zipper II

  6. XM_006019764.3 → XP_006019826.1  C-Jun-amino-terminal kinase-interacting protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A1U7RKN5
    Conserved Domains (1) summary
    pfam16471
    Location:251 → 305
    JIP_LZII; JNK-interacting protein leucine zipper II
Nucleotide Protein
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