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ZMYND11 zinc finger MYND-type containing 11 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102372058, updated on 10-Mar-2024

Summary

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Gene symbol
ZMYND11
Gene description
zinc finger MYND-type containing 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842128.1 (450087..598954)

NW_005842128.1Genomic Context describing neighboring genes Neighboring gene vasoactive intestinal peptide receptor 2 Neighboring gene disco interacting protein 2 homolog C Neighboring gene uncharacterized LOC112550498

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842128 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger MYND domain-containing protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842128.1 Reference ASM45574v1 Primary Assembly

    Range
    450087..598954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025205750.1 → XP_025061535.1  zinc finger MYND domain-containing protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0GTL3
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    cl25857
    Location:496 → 589
    RmuC; RmuC family

  2. XM_025205754.1 → XP_025061539.1  zinc finger MYND domain-containing protein 11 isoform X5

    UniProtKB/TrEMBL
    A0A3Q0GP17
    Conserved Domains (3) summary
    cd05841
    Location:233 → 314
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:119 → 219
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cl25857
    Location:442 → 535
    RmuC; RmuC family

  3. XM_025205751.1 → XP_025061536.1  zinc finger MYND domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0GP34
    Conserved Domains (4) summary
    cd05841
    Location:272 → 353
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:158 → 258
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:102 → 145
    PHD_BS69; PHD finger found in protein BS69
    cl25857
    Location:481 → 574
    RmuC; RmuC family

  4. XM_025205756.1 → XP_025061541.1  zinc finger MYND domain-containing protein 11 isoform X6

    UniProtKB/TrEMBL
    A0A3Q0GP39
    Conserved Domains (3) summary
    cd05841
    Location:218 → 299
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:104 → 204
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cl25857
    Location:427 → 520
    RmuC; RmuC family

  5. XM_025205752.1 → XP_025061537.1  zinc finger MYND domain-containing protein 11 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0GQ55
    Conserved Domains (4) summary
    cd05841
    Location:247 → 328
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:133 → 233
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:77 → 120
    PHD_BS69; PHD finger found in protein BS69
    cl25857
    Location:456 → 549
    RmuC; RmuC family

  6. XM_025205753.1 → XP_025061538.1  zinc finger MYND domain-containing protein 11 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0GTS3
    Conserved Domains (4) summary
    cd05841
    Location:287 → 368
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05492
    Location:173 → 273
    Bromo_ZMYND11; Bromodomain; ZMYND11_like sub-family. ZMYND11 or BS69 is a ubiquitously expressed nuclear protein that has been shown to associate with chromatin. It interacts with chromatin remodeling factors and might play a role in chromatin remodeling and gene ...
    cd15537
    Location:117 → 160
    PHD_BS69; PHD finger found in protein BS69
    cl25857
    Location:496 → 574
    RmuC; RmuC family
Nucleotide Protein
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