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ZNF652 zinc finger protein 652 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102372053, updated on 10-Mar-2024

Summary

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Gene symbol
ZNF652
Gene description
zinc finger protein 652
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842064.1 (1329904..1359575, complement)

NW_005842064.1Genomic Context describing neighboring genes Neighboring gene ABI family member 3 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1 Neighboring gene uncharacterized LOC112550251 Neighboring gene prohibitin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842064 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein 652

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842064.1 Reference ASM45574v1 Primary Assembly

    Range
    1329904..1359575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006039430.3 → XP_006039492.1  LOW QUALITY PROTEIN: zinc finger protein 652

    UniProtKB/TrEMBL
    A0A1U7SDI3
    Conserved Domains (3) summary
    COG5048
    Location:449 → 498
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:397 → 417
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:465 → 488
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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