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DBNL drebrin like [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102370175, updated on 10-Mar-2024

Summary

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Gene symbol
DBNL
Gene description
drebrin like
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842485.1 (768685..798446)

NW_005842485.1Genomic Context describing neighboring genes Neighboring gene trans-golgi network protein 2 Neighboring gene transcription factor 7 like 1 Neighboring gene matrix metalloproteinase-17-like Neighboring gene capping actin protein, gelsolin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842485 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of dendritic spine morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postsynaptic actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of polarized growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
drebrin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842485.1 Reference ASM45574v1 Primary Assembly

    Range
    768685..798446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006031164.3 → XP_006031226.1  drebrin-like protein isoform X3

    UniProtKB/TrEMBL
    A0A1U7S8T6
    Conserved Domains (2) summary
    cd11281
    Location:3 → 113
    ADF_drebrin_like; ADF homology domain of drebrin and actin-binding protein 1 (abp1)
    cd11960
    Location:401 → 454
    SH3_Abp1_eu; Src homology 3 domain of eumetazoan Actin-binding protein 1

  2. XM_006031162.3 → XP_006031224.1  drebrin-like protein isoform X4

    UniProtKB/TrEMBL
    A0A1U7SG59
    Conserved Domains (2) summary
    cd11281
    Location:11 → 120
    ADF_drebrin_like; ADF homology domain of drebrin and actin-binding protein 1 (abp1)
    cd11960
    Location:408 → 461
    SH3_Abp1_eu; Src homology 3 domain of eumetazoan Actin-binding protein 1

  3. XM_025212830.1 → XP_025068615.1  drebrin-like protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q0HDP9
    Conserved Domains (4) summary
    cd11281
    Location:11 → 120
    ADF_drebrin_like; ADF homology domain of drebrin and actin-binding protein 1 (abp1)
    cd11960
    Location:406 → 459
    SH3_Abp1_eu; Src homology 3 domain of eumetazoan Actin-binding protein 1
    cl27539
    Location:185 → 301
    Peptidase_M23; Peptidase family M23
    cl27863
    Location:261 → 369
    SSL_OB; Staphylococcal superantigen-like OB-fold domain

  4. XM_014523440.2 → XP_014378926.1  drebrin-like protein isoform X2

    UniProtKB/TrEMBL
    A0A1U8DF28
    Conserved Domains (2) summary
    cd11281
    Location:11 → 120
    ADF_drebrin_like; ADF homology domain of drebrin and actin-binding protein 1 (abp1)
    cd11960
    Location:383 → 436
    SH3_Abp1_eu; Src homology 3 domain of eumetazoan Actin-binding protein 1
Nucleotide Protein
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