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THRAP3 thyroid hormone receptor associated protein 3 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102367808, updated on 10-Mar-2024

Summary

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Gene symbol
THRAP3
Gene description
thyroid hormone receptor associated protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See THRAP3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842680.1 (66157..122393, complement)

NW_005842680.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102388545 Neighboring gene MAP7 domain containing 1 Neighboring gene serine/threonine kinase 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842680 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyroid hormone receptor-associated protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842680.1 Reference ASM45574v1 Primary Assembly

    Range
    66157..122393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025215861.1 → XP_025071646.1  thyroid hormone receptor-associated protein 3

    UniProtKB/TrEMBL
    A0A1U7SNZ8
    Conserved Domains (1) summary
    pfam15440
    Location:188 → 777
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  2. XM_006033926.3 → XP_006033988.1  thyroid hormone receptor-associated protein 3

    See identical proteins and their annotated locations for XP_006033988.1

    UniProtKB/TrEMBL
    A0A1U7SNZ8
    Conserved Domains (1) summary
    pfam15440
    Location:188 → 777
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  3. XM_025215863.1 → XP_025071648.1  thyroid hormone receptor-associated protein 3

    UniProtKB/TrEMBL
    A0A1U7SNZ8
    Conserved Domains (1) summary
    pfam15440
    Location:188 → 777
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  4. XM_025215864.1 → XP_025071649.1  thyroid hormone receptor-associated protein 3

    UniProtKB/TrEMBL
    A0A1U7SNZ8
    Conserved Domains (1) summary
    pfam15440
    Location:188 → 777
    THRAP3_BCLAF1; THRAP3/BCLAF1 family

  5. XM_025215862.1 → XP_025071647.1  thyroid hormone receptor-associated protein 3

    UniProtKB/TrEMBL
    A0A1U7SNZ8
    Conserved Domains (1) summary
    pfam15440
    Location:188 → 777
    THRAP3_BCLAF1; THRAP3/BCLAF1 family
Nucleotide Protein
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