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SSX2IPA synovial sarcoma, X breakpoint 2 interacting protein a [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102366265, updated on 10-Mar-2024

Summary

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Gene symbol
SSX2IPA
Gene description
synovial sarcoma, X breakpoint 2 interacting protein a
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Also known as
SSX2IP
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819194.1 (1272930..1317910, complement)

NW_005819194.1Genomic Context describing neighboring genes Neighboring gene vitellogenin-like Neighboring gene vitellogenin-like Neighboring gene atrial natriuretic peptide receptor 2-like Neighboring gene uncharacterized LOC106703100 Neighboring gene lysophosphatidic acid receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819194.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
afadin- and alpha-actinin-binding protein
Names
SSX family member 2 interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819194.1 Reference LatCha1 Primary Assembly

    Range
    1272930..1317910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005993869.2 → XP_005993931.1  afadin- and alpha-actinin-binding protein

    UniProtKB/TrEMBL
    H3B6R9
    Conserved Domains (1) summary
    cl23720
    Location:19 → 124
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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