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SCRN3 secernin 3 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102366196, updated on 10-Mar-2024

Summary

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Gene symbol
SCRN3
Gene description
secernin 3
See related
Ensembl:ENSLACG00000004212
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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See SCRN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819949.1 (113714..144095, complement)

NW_005819949.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 155a Neighboring gene corepressor interacting with RBPJ, CIR1 Neighboring gene sp9 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819949.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type exopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dipeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secernin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819949.1 Reference LatCha1 Primary Assembly

    Range
    113714..144095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006003521.2 → XP_006003583.1  secernin-3 isoform X2

    See identical proteins and their annotated locations for XP_006003583.1

    UniProtKB/TrEMBL
    H3A518
    Conserved Domains (1) summary
    cl00467
    Location:12 → 232
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...

  2. XM_006003520.2 → XP_006003582.1  secernin-3 isoform X2

    See identical proteins and their annotated locations for XP_006003582.1

    UniProtKB/TrEMBL
    H3A518
    Related
    ENSLACP00000022871.1, ENSLACT00000025335.1
    Conserved Domains (1) summary
    cl00467
    Location:12 → 232
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...

  3. XM_006003522.2 → XP_006003584.1  secernin-3 isoform X2

    See identical proteins and their annotated locations for XP_006003584.1

    UniProtKB/TrEMBL
    H3A518
    Related
    ENSLACP00000004739.1, ENSLACT00000004778.1
    Conserved Domains (1) summary
    cl00467
    Location:12 → 232
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...

  4. XM_006003519.2 → XP_006003581.1  secernin-3 isoform X1

    Conserved Domains (1) summary
    cl00467
    Location:20 → 240
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
Nucleotide Protein
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