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MYOG myogenin [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365958, updated on 10-Mar-2024

Summary

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Gene symbol
MYOG
Gene description
myogenin
See related
Ensembl:ENSLACG00000014874
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819025.1 (1119907..1127608)

NW_005819025.1Genomic Context describing neighboring genes Neighboring gene adenosine A1 receptor b Neighboring gene myb-related transcription factor, partner of profilin-like Neighboring gene PTPRF interacting protein alpha 4 Neighboring gene homeodomain interacting protein kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819025.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myogenin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819025.1 Reference LatCha1 Primary Assembly

    Range
    1119907..1127608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005987600.2 → XP_005987662.1  myogenin

    UniProtKB/TrEMBL
    H3B4R5
    Related
    ENSLACP00000016886.1, ENSLACT00000017005.1
    Conserved Domains (3) summary
    smart00520
    Location:1 → 96
    BASIC; Basic domain in HLH proteins of MYOD family
    pfam00010
    Location:92 → 143
    HLH; Helix-loop-helix DNA-binding domain
    pfam12232
    Location:173 → 226
    Myf5; Myogenic determination factor 5
Nucleotide Protein
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Gene LinkOut

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