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REXO5 RNA exonuclease 5 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365756, updated on 2-Nov-2023

Summary

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Gene symbol
REXO5
Gene description
RNA exonuclease 5
See related
Ensembl:ENSLACG00000001758
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819549.1 (28459..64697, complement)

NW_005819549.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C8orf33 homolog Neighboring gene ERI1 exoribonuclease family member 2 Neighboring gene acyl-CoA synthetase medium chain family member 3 Neighboring gene THUMP domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819549.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative RNA exonuclease NEF-sp

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819549.1 Reference LatCha1 Primary Assembly

    Range
    28459..64697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014490569.1 → XP_014346055.1  putative RNA exonuclease NEF-sp isoform X2

    UniProtKB/TrEMBL
    H2ZX47

  2. XM_005999616.2 → XP_005999678.1  putative RNA exonuclease NEF-sp isoform X1

    UniProtKB/TrEMBL
    H2ZX47
    Related
    ENSLACP00000001968.1, ENSLACT00000001982.1
    Conserved Domains (3) summary
    cd06145
    Location:68 → 216
    REX1_like; DEDDh 3'-5' exonuclease domain of RNA exonuclease 1, -3 and similar eukaryotic proteins
    COG0847
    Location:70 → 220
    DnaQ; DNA polymerase III, epsilon subunit or related 3'-5' exonuclease [Replication, recombination and repair]
    cl17169
    Location:371 → 441
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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