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PGD phosphogluconate dehydrogenase [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102363776, updated on 10-Mar-2024

Summary

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Gene symbol
PGD
Gene description
phosphogluconate dehydrogenase
See related
Ensembl:ENSLACG00000013355
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819697.1 (848476..868146, complement)

NW_005819697.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily member 8-like Neighboring gene uncharacterized LOC102364816 Neighboring gene kinesin family member 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819697.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphogluconate dehydrogenase (decarboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-gluconate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphogluconate dehydrogenase, decarboxylating

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819697.1 Reference LatCha1 Primary Assembly

    Range
    848476..868146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006001297.2 → XP_006001359.1  6-phosphogluconate dehydrogenase, decarboxylating

    UniProtKB/TrEMBL
    H3AZU8
    Related
    ENSLACP00000015169.2, ENSLACT00000015275.2
    Conserved Domains (3) summary
    PRK09287
    Location:14 → 473
    PRK09287; 6-phosphogluconate dehydrogenase; Validated
    pfam00393
    Location:180 → 469
    6PGD; 6-phosphogluconate dehydrogenase, C-terminal domain
    pfam03446
    Location:4 → 176
    NAD_binding_2; NAD binding domain of 6-phosphogluconate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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