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PUS1 pseudouridine synthase 1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102363259, updated on 10-Mar-2024

Summary

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Gene symbol
PUS1
Gene description
pseudouridine synthase 1
See related
Ensembl:ENSLACG00000018598
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819019.1 (3723123..3733785, complement)

NW_005819019.1Genomic Context describing neighboring genes Neighboring gene nucleolar complex associated 4 homolog Neighboring gene E1A binding protein p400 Neighboring gene unc-51 like autophagy activating kinase 1 Neighboring gene matrix metallopeptidase 17a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819019.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA pseudouridine synthase A, mitochondrial
Names
pseudouridylate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819019.1 Reference LatCha1 Primary Assembly

    Range
    3723123..3733785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005987177.2 → XP_005987239.1  tRNA pseudouridine synthase A, mitochondrial

    UniProtKB/TrEMBL
    H3BGZ8
    Related
    ENSLACP00000021169.1, ENSLACT00000021309.1
    Conserved Domains (2) summary
    cd02568
    Location:61 → 312
    PseudoU_synth_PUS1_PUS2; Pseudouridine synthase, PUS1/ PUS2 like
    COG0101
    Location:56 → 334
    TruA; tRNA U38,U39,U40 pseudouridine synthase TruA [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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