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CDC42EP2 CDC42 effector protein 2 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102352779, updated on 11-Apr-2020

Summary

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Gene symbol
CDC42EP2
Gene description
CDC42 effector protein 2
See related
Ensembl:ENSLACG00000010553
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819813.1 (468794..514815)

NW_005819813.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene polymerase (DNA directed), alpha 2 Neighboring gene N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like Neighboring gene spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005819813.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cdc42 effector protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819813.1 Reference LatCha1 Primary Assembly

    Range
    468794..514815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006002452.2 → XP_006002514.1  cdc42 effector protein 2

    See identical proteins and their annotated locations for XP_006002514.1

    UniProtKB/TrEMBL
    H3AQR9
    Conserved Domains (2) summary
    pfam14957
    Location:105 → 238
    BORG_CEP; Cdc42 effector
    cl00113
    Location:29 → 68
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

  2. XM_006002451.2 → XP_006002513.1  cdc42 effector protein 2

    See identical proteins and their annotated locations for XP_006002513.1

    UniProtKB/TrEMBL
    H3AQR9
    Conserved Domains (2) summary
    pfam14957
    Location:105 → 238
    BORG_CEP; Cdc42 effector
    cl00113
    Location:29 → 68
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

  3. XM_006002453.2 → XP_006002515.1  cdc42 effector protein 2

    See identical proteins and their annotated locations for XP_006002515.1

    UniProtKB/TrEMBL
    H3AQR9
    Related
    ENSLACP00000011990.1, ENSLACT00000012081.1
    Conserved Domains (2) summary
    pfam14957
    Location:105 → 238
    BORG_CEP; Cdc42 effector
    cl00113
    Location:29 → 68
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
Nucleotide Protein
Heading Accession and Version

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