U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SREBF1 sterol regulatory element binding transcription factor 1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102349558, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SREBF1
Gene description
sterol regulatory element binding transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SREBF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819338.1 (814813..898064, complement)

NW_005819338.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106703584 Neighboring gene phosphatidylethanolamine N-methyltransferase Neighboring gene retinoic acid induced 1 Neighboring gene target of myb1 like 2 membrane trafficking protein Neighboring gene uncharacterized LOC106703585 Neighboring gene dynein regulatory complex subunit 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005819338.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sterol regulatory element-binding protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005819338.1 Reference LatCha1 Primary Assembly

    Range
    814813..898064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014488766.1 → XP_014344252.1  sterol regulatory element-binding protein 1 isoform X1

  2. XM_014488768.1 → XP_014344254.1  sterol regulatory element-binding protein 1 isoform X2

  3. XM_014488767.1 → XP_014344253.1  sterol regulatory element-binding protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.