U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GABARAPL1 GABA type A receptor associated protein like 1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102348715, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
GABARAPL1
Gene description
GABA type A receptor associated protein like 1
See related
Ensembl:ENSLACG00000006869
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005821845.1 (245384..252183, complement)

NW_005821845.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102349799 Neighboring gene serine/threonine/tyrosine kinase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005821845.1 Unplaced Scaffold Reference LatCha1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
gamma-aminobutyric acid receptor-associated protein-like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Latimeria chalumnae Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LatCha1 Primary Assembly

Genomic

  1. NW_005821845.1 Reference LatCha1 Primary Assembly

    Range
    245384..252183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006011635.2 → XP_006011697.1  gamma-aminobutyric acid receptor-associated protein-like 1

    UniProtKB/TrEMBL
    H3ADN4
    Related
    ENSLACP00000007755.1, ENSLACT00000007821.1
    Conserved Domains (1) summary
    cd01611
    Location:5 → 116
    GABARAP; Ubiquitin domain of GABA-receptor-associated protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.