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tspan3a tetraspanin 3a [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102304376, updated on 10-Mar-2024

Summary

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Gene symbol
tspan3a
Gene description
tetraspanin 3a
See related
Ensembl:ENSHBUG00000000458
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Also known as
tspan3
Orthologs
human zebrafish all
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Genomic context

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See tspan3a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582475.1 (485138..488860)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179499.1 (478777..482512)

NW_024582475.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102303249 Neighboring gene cholesterol 25-hydroxylase like 1, tandem duplicate 2 Neighboring gene proline-serine-threonine phosphatase interacting protein 1a Neighboring gene reticulocalbin 2 Neighboring gene S-phase cyclin A-associated protein in the ER

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582475.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    485138..488860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005928703.2 → XP_005928765.1  tetraspanin-3

    See identical proteins and their annotated locations for XP_005928765.1

    UniProtKB/TrEMBL
    A0A3Q2WX33
    Related
    ENSHBUP00000030556.1
    Conserved Domains (2) summary
    cd03163
    Location:104 → 210
    TM4SF8_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:9 → 232
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

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