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mcm9 minichromosome maintenance 9 homologous recombination repair factor [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102302191, updated on 10-Mar-2024

Summary

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Gene symbol
mcm9
Gene description
minichromosome maintenance 9 homologous recombination repair factor
See related
Ensembl:ENSHBUG00000001321
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
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Genomic context

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See mcm9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582642.1 (283305..313799, complement)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179693.1 (466336..496823)

NW_024582642.1Genomic Context describing neighboring genes Neighboring gene gap junction Cx32.2 protein Neighboring gene gap junction protein alpha 1b Neighboring gene centrosomal protein 85, like Neighboring gene golgi-associated PDZ and coiled-coil motif containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA duplex unwinding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MCM complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA helicase MCM9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582642.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    283305..313799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005940611.3 → XP_005940673.1  DNA helicase MCM9 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3BGH4
    Related
    ENSHBUP00000000161.1
    Conserved Domains (3) summary
    smart00350
    Location:127 → 613
    MCM; minichromosome maintenance proteins
    pfam14551
    Location:15 → 139
    MCM_N; MCM N-terminal domain
    cl21455
    Location:357 → 493
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_005940612.3 → XP_005940674.1  DNA helicase MCM9 isoform X2

    Conserved Domains (3) summary
    smart00350
    Location:114 → 600
    MCM; minichromosome maintenance proteins
    pfam14551
    Location:9 → 126
    MCM_N; MCM N-terminal domain
    cl21455
    Location:344 → 480
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_005940613.3 → XP_005940675.1  DNA helicase MCM9 isoform X4

    Conserved Domains (2) summary
    smart00350
    Location:1 → 457
    MCM; minichromosome maintenance proteins
    cl21455
    Location:201 → 337
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. XM_042227788.1 → XP_042083722.1  DNA helicase MCM9 isoform X3

    Conserved Domains (1) summary
    cd17760
    Location:267 → 564
    MCM9; DNA helicase Mcm9

  5. XM_042227789.1 → XP_042083723.1  DNA helicase MCM9 isoform X5

    Conserved Domains (1) summary
    cd17760
    Location:316 → 613
    MCM9; DNA helicase Mcm9
Nucleotide Protein
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