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nbeal1 neurobeachin-like 1 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102301457, updated on 10-Mar-2024

Summary

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Gene symbol
nbeal1
Gene description
neurobeachin-like 1
See related
Ensembl:ENSHBUG00000016040
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
54
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582500.1 (106817..168451)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179564.1 (94127..156335)

NW_024582500.1Genomic Context describing neighboring genes Neighboring gene trafficking protein, kinesin binding 2 Neighboring gene STE20 related adaptor beta Neighboring gene lectin Neighboring gene adrenodoxin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurobeachin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582500.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    106817..168451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014337308.2 → XP_014192794.1  neurobeachin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2WUX0
    Conserved Domains (7) summary
    COG2319
    Location:2424 → 2716
    WD40; WD40 repeat [General function prediction only]
    cd01201
    Location:1950 → 2047
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    pfam02138
    Location:2068 → 2347
    Beach; Beige/BEACH domain
    pfam15787
    Location:907 → 1158
    DUF4704; Domain of unknown function (DUF4704)
    pfam16057
    Location:1643 → 1897
    DUF4800; Domain of unknown function (DUF4800)
    sd00039
    Location:2508 → 2553
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:2472 → 2745
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_014337309.2 → XP_014192795.1  neurobeachin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2WUX0
    Related
    ENSHBUP00000030704.1
    Conserved Domains (7) summary
    COG2319
    Location:2395 → 2687
    WD40; WD40 repeat [General function prediction only]
    cd01201
    Location:1921 → 2018
    PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
    pfam02138
    Location:2039 → 2318
    Beach; Beige/BEACH domain
    pfam15787
    Location:878 → 1129
    DUF4704; Domain of unknown function (DUF4704)
    pfam16057
    Location:1614 → 1868
    DUF4800; Domain of unknown function (DUF4800)
    sd00039
    Location:2479 → 2524
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:2443 → 2716
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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