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tp73 tumor protein p73 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102297399, updated on 10-Mar-2024

Summary

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Gene symbol
tp73
Gene description
tumor protein p73
See related
Ensembl:ENSHBUG00000011409
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024583628.1 (34160..57878)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005180758.1 (32224..54634)

NW_024583628.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 regulated 1-like Neighboring gene WD repeat containing, antisense to TP73

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein tetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor protein p73

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024583628.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    34160..57878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014331016.2 → XP_014186502.1  tumor protein p73 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2WN81
    Conserved Domains (4) summary
    smart00454
    Location:508 → 566
    SAM; Sterile alpha motif
    pfam00870
    Location:123 → 319
    P53; P53 DNA-binding domain
    pfam07710
    Location:355 → 394
    P53_tetramer; P53 tetramerization motif
    cl15755
    Location:508 → 567
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_005952070.3 → XP_005952132.1  tumor protein p73 isoform X1

    See identical proteins and their annotated locations for XP_005952132.1

    UniProtKB/TrEMBL
    A0A3Q2WN81
    Conserved Domains (4) summary
    smart00454
    Location:508 → 566
    SAM; Sterile alpha motif
    pfam00870
    Location:123 → 319
    P53; P53 DNA-binding domain
    pfam07710
    Location:355 → 394
    P53_tetramer; P53 tetramerization motif
    cl15755
    Location:508 → 567
    SAM_superfamily; SAM (Sterile alpha motif )

  3. XM_042216820.1 → XP_042072754.1  tumor protein p73 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2WN81
    Conserved Domains (3) summary
    cd08367
    Location:137 → 319
    P53; P53 DNA-binding domain
    pfam07710
    Location:356 → 392
    P53_tetramer; P53 tetramerisation motif
    cl15755
    Location:504 → 563
    SAM_superfamily; SAM (Sterile alpha motif )

  4. XM_005952072.3 → XP_005952134.1  tumor protein p73 isoform X3

    See identical proteins and their annotated locations for XP_005952134.1

    UniProtKB/TrEMBL
    A0A3Q2WN81
    Related
    ENSHBUP00000027908.1
    Conserved Domains (4) summary
    smart00454
    Location:445 → 503
    SAM; Sterile alpha motif
    pfam00870
    Location:60 → 256
    P53; P53 DNA-binding domain
    pfam07710
    Location:292 → 331
    P53_tetramer; P53 tetramerization motif
    cl15755
    Location:445 → 504
    SAM_superfamily; SAM (Sterile alpha motif )

  5. XM_042216821.1 → XP_042072755.1  tumor protein p73 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2WN81
    Conserved Domains (2) summary
    cd08367
    Location:74 → 256
    P53; P53 DNA-binding domain
    cl15755
    Location:441 → 500
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein
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