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gdap2 ganglioside induced differentiation associated protein 2 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102295604, updated on 10-Mar-2024

Summary

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Gene symbol
gdap2
Gene description
ganglioside induced differentiation associated protein 2
See related
Ensembl:ENSHBUG00000004410
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
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Genomic context

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See gdap2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582515.1 (175844..203835, complement)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179546.1 (175242..201621, complement)

NW_024582515.1Genomic Context describing neighboring genes Neighboring gene mannosidase, alpha, class 1A, member 2 Neighboring gene uncharacterized LOC121815210 Neighboring gene terminal nucleotidyltransferase 5C Neighboring gene WD repeat domain 3 Neighboring gene zona pellucida-like domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ganglioside-induced differentiation-associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582515.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    175844..203835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005932499.3 → XP_005932561.1  ganglioside-induced differentiation-associated protein 2

    See identical proteins and their annotated locations for XP_005932561.1

    UniProtKB/TrEMBL
    A0A3Q3CIW9
    Related
    ENSHBUP00000023592.1
    Conserved Domains (3) summary
    COG2110
    Location:64 → 222
    YmdB; O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain [Translation, ribosomal structure and biogenesis]
    cd02905
    Location:58 → 196
    Macro_GDAP2_like; Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    pfam13716
    Location:350 → 473
    CRAL_TRIO_2; Divergent CRAL/TRIO domain

  2. XM_005932498.3 → XP_005932560.1  ganglioside-induced differentiation-associated protein 2

    See identical proteins and their annotated locations for XP_005932560.1

    UniProtKB/TrEMBL
    A0A3Q3CIW9
    Related
    ENSHBUP00000003166.1
    Conserved Domains (3) summary
    COG2110
    Location:64 → 222
    YmdB; O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain [Translation, ribosomal structure and biogenesis]
    cd02905
    Location:58 → 196
    Macro_GDAP2_like; Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    pfam13716
    Location:350 → 473
    CRAL_TRIO_2; Divergent CRAL/TRIO domain

  3. XM_005932497.3 → XP_005932559.1  ganglioside-induced differentiation-associated protein 2

    See identical proteins and their annotated locations for XP_005932559.1

    UniProtKB/TrEMBL
    A0A3Q3CIW9
    Conserved Domains (3) summary
    COG2110
    Location:64 → 222
    YmdB; O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain [Translation, ribosomal structure and biogenesis]
    cd02905
    Location:58 → 196
    Macro_GDAP2_like; Macro domain, GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    pfam13716
    Location:350 → 473
    CRAL_TRIO_2; Divergent CRAL/TRIO domain
Nucleotide Protein
Heading Accession and Version

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