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wdr83 WD repeat domain containing 83 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102293057, updated on 10-Mar-2024

Summary

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Gene symbol
wdr83
Gene description
WD repeat domain containing 83
See related
Ensembl:ENSHBUG00000009141
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582840.1 (119718..124607, complement)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179894.1 (112744..117627, complement)

NW_024582840.1Genomic Context describing neighboring genes Neighboring gene transcription factor IIIA Neighboring gene persephin Neighboring gene YJU2 splicing factor homolog B Neighboring gene WD repeat domain 83 opposite strand Neighboring gene calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat domain-containing protein 83
Names
WD repeat domain 83

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582840.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    119718..124607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005946441.3 → XP_005946503.1  WD repeat domain-containing protein 83

    See identical proteins and their annotated locations for XP_005946503.1

    UniProtKB/TrEMBL
    A0A3Q2VA09
    Related
    ENSHBUP00000007640.1
    Conserved Domains (3) summary
    COG2319
    Location:17 → 303
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:17 → 303
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:30 → 65
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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