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cotl1 coactosin-like F-actin binding protein 1 [ Haplochromis burtoni (Burton's mouthbrooder) ]

Gene ID: 102292412, updated on 10-Mar-2024

Summary

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Gene symbol
cotl1
Gene description
coactosin-like F-actin binding protein 1
See related
Ensembl:ENSHBUG00000018725
Gene type
protein coding
RefSeq status
MODEL
Organism
Haplochromis burtoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis
Orthologs
human zebrafish all
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Genomic context

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See cotl1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current NCSU_Asbu1 (GCF_018398535.1) Unplaced Scaffold NW_024582590.1 (560086..573988)
101 previous assembly AstBur1.0 (GCF_000239415.1) Unplaced Scaffold NW_005179626.1 (537937..551839)

NW_024582590.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102298364 Neighboring gene kelch-like family member 36 Neighboring gene MTOR associated protein, eak-7 homolog Neighboring gene phospholipase C, gamma 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of polarized growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coactosin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haplochromis burtoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_Asbu1 Primary Assembly

Genomic

  1. NW_024582590.1 Reference NCSU_Asbu1 Primary Assembly

    Range
    560086..573988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005937452.1 → XP_005937514.1  coactosin-like protein

    See identical proteins and their annotated locations for XP_005937514.1

    UniProtKB/TrEMBL
    A0A3Q2XAV1
    Related
    ENSHBUP00000032440.1, ENSHBUT00000025362.1
    Conserved Domains (1) summary
    cd11282
    Location:9 → 120
    ADF_coactosin_like; Coactosin-like members of the ADF homology domain family
Nucleotide Protein
Heading Accession and Version

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