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EMG1 EMG1 N1-specific pseudouridine methyltransferase [ Bos mutus (wild yak) ]

Gene ID: 102285025, updated on 10-Mar-2024

Summary

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Gene symbol
EMG1
Gene description
EMG1 N1-specific pseudouridine methyltransferase
Locus tag
M91_17658
See related
Ensembl:ENSBMUG00000009841
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See EMG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005395530.1 (668841..674560)

NW_005395530.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 6 Neighboring gene prohibitin 2 Neighboring gene lysophosphatidylcholine acyltransferase 3 Neighboring gene complement C1s Neighboring gene complement C1r

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005395530.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (pseudouridine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosomal RNA small subunit methyltransferase NEP1
Names
Putative ribosome biogenesis protein NEP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005395530.1 Reference BosGru_v2.0 Primary Assembly

    Range
    668841..674560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005907495.2 → XP_005907557.1  ribosomal RNA small subunit methyltransferase NEP1 isoform X2

    See identical proteins and their annotated locations for XP_005907557.1

    UniProtKB/TrEMBL
    L8HU92
    Related
    ENSBMUP00000012881.1, ENSBMUT00000014911.1
    Conserved Domains (1) summary
    cd18088
    Location:43 → 238
    Nep1-like; 18S rRNA (pseudouridine(1248)-N1)-methyltransferase Nep1

  2. XM_014482071.1 → XP_014337557.1  ribosomal RNA small subunit methyltransferase NEP1 isoform X1

    Conserved Domains (1) summary
    pfam03587
    Location:45 → 208
    EMG1; EMG1/NEP1 methyltransferase
Nucleotide Protein
Heading Accession and Version

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