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STX11 syntaxin 11 [ Bos mutus (wild yak) ]

Gene ID: 102277368, updated on 10-Mar-2024

Summary

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Gene symbol
STX11
Gene description
syntaxin 11
Locus tag
M91_17460
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393050.1 (1093137..1124484, complement)

NW_005393050.1Genomic Context describing neighboring genes Neighboring gene transfer RNA ochre suppressor(anticodon UUA) Neighboring gene utrophin Neighboring gene splicing factor 3b subunit 5 Neighboring gene PLAG1 like zinc finger 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393050.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic active zone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-11
Names
Syntaxin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393050.1 Reference BosGru_v2.0 Primary Assembly

    Range
    1093137..1124484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005889081.2 → XP_005889143.1  syntaxin-11

    See identical proteins and their annotated locations for XP_005889143.1

    UniProtKB/TrEMBL
    L8IZ02
    Conserved Domains (2) summary
    pfam00804
    Location:41 → 238
    Syntaxin; Syntaxin
    cl26014
    Location:205 → 279
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
Nucleotide Protein
Heading Accession and Version

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