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SYBU syntabulin [ Bos mutus (wild yak) ]

Gene ID: 102272887, updated on 10-Mar-2024

Summary

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Gene symbol
SYBU
Gene description
syntabulin
Locus tag
M91_14803
See related
Ensembl:ENSBMUG00000001066
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See SYBU in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005394585.1 (125577..214010)

NW_005394585.1Genomic Context describing neighboring genes Neighboring gene protein SMG5 pseudogene Neighboring gene platelet-activating factor acetylhydrolase IB subunit gamma pseudogene Neighboring gene estrogen receptor binding site associated antigen 9 Neighboring gene PKHD1 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005394585.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axonal transport of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntabulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005394585.1 Reference BosGru_v2.0 Primary Assembly

    Range
    125577..214010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005902657.1 → XP_005902719.1  syntabulin isoform X1

    UniProtKB/TrEMBL
    L8I5A8
    Conserved Domains (1) summary
    pfam15290
    Location:254 → 444
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  2. XM_005902658.2 → XP_005902720.1  syntabulin isoform X2

    UniProtKB/TrEMBL
    L8I5A8
    Related
    ENSBMUP00000001293.1, ENSBMUT00000001517.1
    Conserved Domains (1) summary
    pfam15290
    Location:234 → 424
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  3. XM_005902659.1 → XP_005902721.1  syntabulin isoform X3

    Related
    ENSBMUP00000001298.1, ENSBMUT00000001523.1
    Conserved Domains (1) summary
    pfam15290
    Location:102 → 292
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp
Nucleotide Protein
Heading Accession and Version

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