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MMP15 matrix metallopeptidase 15 [ Bos mutus (wild yak) ]

Gene ID: 102271819, updated on 10-Mar-2024

Summary

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Gene symbol
MMP15
Gene description
matrix metallopeptidase 15
Locus tag
M91_00071
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005394162.1 (1961884..1973221)

NW_005394162.1Genomic Context describing neighboring genes Neighboring gene sperm microtubule inner protein 8 Neighboring gene zinc finger protein 319 Neighboring gene U6 snRNA biogenesis phosphodiesterase 1 Neighboring gene cilia and flagella associated protein 20 Neighboring gene casein kinase 2 alpha 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005394162.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: matrix metalloproteinase-15
Names
Matrix metalloproteinase-14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005394162.1 Reference BosGru_v2.0 Primary Assembly

    Range
    1961884..1973221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014479456.1 → XP_014334942.1  LOW QUALITY PROTEIN: matrix metalloproteinase-15

    UniProtKB/TrEMBL
    L8IB19
    Conserved Domains (5) summary
    cd00094
    Location:395 → 587
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
    cd04278
    Location:166 → 332
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
    pfam00413
    Location:166 → 332
    Peptidase_M10; Matrixin
    pfam01471
    Location:83 → 134
    PG_binding_1; Putative peptidoglycan binding domain
    pfam11857
    Location:678 → 703
    DUF3377; Domain of unknown function (DUF3377)
Nucleotide Protein
Heading Accession and Version

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