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PCDH18 protocadherin 18 [ Bos mutus (wild yak) ]

Gene ID: 102266928, updated on 10-Mar-2024

Summary

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Gene symbol
PCDH18
Gene description
protocadherin 18
Locus tag
M91_12341
See related
Ensembl:ENSBMUG00000022955
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PCDH18 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393355.1 (11741..25808, complement)

NW_005393355.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393355.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-18
Names
Protocadherin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393355.1 Reference BosGru_v2.0 Primary Assembly

    Range
    11741..25808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005892173.2 → XP_005892235.1  protocadherin-18 isoform X2

    UniProtKB/TrEMBL
    A0A6B0R3Y5, L8IQT5
    Conserved Domains (2) summary
    cd11304
    Location:467 → 569
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:27 → 108
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus

  2. XM_005892172.2 → XP_005892234.1  protocadherin-18 isoform X1

    UniProtKB/TrEMBL
    A0A6B0R3Y5, L8IQT5
    Related
    ENSBMUP00000030721.1, ENSBMUT00000035350.1
    Conserved Domains (2) summary
    cd11304
    Location:467 → 569
    Cadherin_repeat; Cadherin tandem repeat domain
    cl09101
    Location:27 → 108
    E_set; Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or C terminus
Nucleotide Protein
Heading Accession and Version

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