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NIPBL NIPBL cohesin loading factor [ Bos mutus (wild yak) ]

Gene ID: 102265469, updated on 10-Mar-2024

Summary

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Gene symbol
NIPBL
Gene description
NIPBL cohesin loading factor
See related
Ensembl:ENSBMUG00000004221
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
46
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005395390.1 (70862..186292, complement)

NW_005395390.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C5orf42-like Neighboring gene uncharacterized protein C5orf42-like Neighboring gene solute carrier family 1 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005395390.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in digestive tract development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic viscerocranium morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of mitotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of protein localization to chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cohesin loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication-born double-strand break repair via sister chromatid exchange IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Scc2-Scc4 cohesin loading complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nipped-B-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005395390.1 Reference BosGru_v2.0 Primary Assembly

    Range
    70862..186292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014481879.1 → XP_014337365.1  nipped-B-like protein

    UniProtKB/TrEMBL
    A0A6B0S1M4
    Related
    ENSBMUP00000005444.1, ENSBMUT00000006321.1
    Conserved Domains (6) summary
    PHA03151
    Location:556 → 733
    PHA03151; hypothetical protein; Provisional
    pfam07223
    Location:113 → 307
    DUF1421; Protein of unknown function (DUF1421)
    pfam08648
    Location:1103 → 1160
    DUF1777; Protein of unknown function (DUF1777)
    pfam12765
    Location:1794 → 1835
    Cohesin_HEAT; HEAT repeat associated with sister chromatid cohesion
    pfam12830
    Location:2276 → 2454
    Nipped-B_C; Sister chromatid cohesion C-terminus
    sd00044
    Location:1811 → 1839
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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