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SON SON DNA and RNA binding protein [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102261637, updated on 30-Mar-2024

Summary

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Gene symbol
SON
Gene description
SON DNA and RNA binding protein
Locus tag
D623_10017943
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See SON in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005354965.1 (1300663..1334171)

NW_005354965.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C28 Neighboring gene phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase Neighboring gene DNA replication fork stabilization factor DONSON Neighboring gene crystallin zeta like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005354965.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SON
Names
Protein SON
SON DNA binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005354965.1 Reference ASM41265v1

    Range
    1300663..1334171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005860724.2 → XP_005860786.1  protein SON isoform X1

    Conserved Domains (2) summary
    smart00358
    Location:2380 → 2448
    DSRM; Double-stranded RNA binding motif
    pfam01585
    Location:2313 → 2356
    G-patch; G-patch domain

  2. XM_005860726.2 → XP_005860788.1  protein SON isoform X3

    See identical proteins and their annotated locations for XP_005860788.1

    UniProtKB/TrEMBL
    S7MIQ6
    Conserved Domains (2) summary
    cd00048
    Location:2379 → 2416
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam01585
    Location:2313 → 2356
    G-patch; G-patch domain

  3. XM_005860727.2 → XP_005860789.1  protein SON isoform X4

    Conserved Domains (2) summary
    PHA03247
    Location:295 → 680
    PHA03247; large tegument protein UL36; Provisional
    PRK10811
    Location:1323 → 1479
    rne; ribonuclease E; Reviewed

  4. XM_005860728.2 → XP_005860790.1  protein SON isoform X5

    Conserved Domains (2) summary
    PHA03247
    Location:295 → 680
    PHA03247; large tegument protein UL36; Provisional
    PRK10811
    Location:1323 → 1479
    rne; ribonuclease E; Reviewed

  5. XM_005860729.2 → XP_005860791.1  protein SON isoform X6

    Conserved Domains (2) summary
    PHA03247
    Location:295 → 680
    PHA03247; large tegument protein UL36; Provisional
    PRK10811
    Location:1323 → 1479
    rne; ribonuclease E; Reviewed

  6. XM_014535173.1 → XP_014390659.1  protein SON isoform X2

    Conserved Domains (2) summary
    smart00358
    Location:2360 → 2428
    DSRM; Double-stranded RNA binding motif
    pfam01585
    Location:2293 → 2336
    G-patch; G-patch domain
Nucleotide Protein
Heading Accession and Version

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