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UBR3 ubiquitin protein ligase E3 component n-recognin 3 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102253625, updated on 30-Mar-2024

Summary

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Gene symbol
UBR3
Gene description
ubiquitin protein ligase E3 component n-recognin 3
Locus tag
D623_10034935
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005353838.1 (3622522..3808540)

NW_005353838.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106727369 Neighboring gene kelch like family member 23 Neighboring gene methyltransferase 5, N6-adenosine Neighboring gene small RNA binding exonuclease protection factor La Neighboring gene kanadaptin-like Neighboring gene myosin IIIB Neighboring gene peptidyl-prolyl cis-trans isomerase B-like Neighboring gene uncharacterized LOC106727373

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005353838.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process via the N-end rule pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UBR3
Names
ubiquitin protein ligase E3 component n-recognin 3 (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005353838.1 Reference ASM41265v1

    Range
    3622522..3808540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014545642.1 → XP_014401128.1  E3 ubiquitin-protein ligase UBR3 isoform X1

    UniProtKB/TrEMBL
    S7MFY9
    Conserved Domains (1) summary
    pfam02207
    Location:1 → 46
    zf-UBR; Putative zinc finger in N-recognin (UBR box)

  2. XM_014545644.1 → XP_014401130.1  E3 ubiquitin-protein ligase UBR3 isoform X2

    UniProtKB/TrEMBL
    S7MFY9
    Conserved Domains (1) summary
    pfam02207
    Location:1 → 46
    zf-UBR; Putative zinc finger in N-recognin (UBR box)

  3. XM_014545646.1 → XP_014401132.1  E3 ubiquitin-protein ligase UBR3 isoform X3

    UniProtKB/TrEMBL
    S7MFY9
    Conserved Domains (1) summary
    pfam02207
    Location:1 → 46
    zf-UBR; Putative zinc finger in N-recognin (UBR box)

  4. XM_014545650.1 → XP_014401136.1  E3 ubiquitin-protein ligase UBR3 isoform X4

    UniProtKB/TrEMBL
    S7MFY9
    Conserved Domains (1) summary
    pfam02207
    Location:1 → 46
    zf-UBR; Putative zinc finger in N-recognin (UBR box)

  5. XM_014545656.1 → XP_014401142.1  E3 ubiquitin-protein ligase UBR3 isoform X5

    UniProtKB/TrEMBL
    S7MFY9
    Conserved Domains (1) summary
    pfam02207
    Location:1 → 46
    zf-UBR; Putative zinc finger in N-recognin (UBR box)

  6. XM_014545660.1 → XP_014401146.1  E3 ubiquitin-protein ligase UBR3 isoform X6

    UniProtKB/TrEMBL
    S7MFY9
    Conserved Domains (1) summary
    pfam02207
    Location:1 → 46
    zf-UBR; Putative zinc finger in N-recognin (UBR box)
Nucleotide Protein
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