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ATG2B autophagy related 2B [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102249037, updated on 30-Mar-2024

Summary

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Gene symbol
ATG2B
Gene description
autophagy related 2B
Locus tag
D623_10009707
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005360391.1 (1042747..1116548)

NW_005360391.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 7 Neighboring gene GSK3B interacting protein Neighboring gene bradykinin receptor B1 Neighboring gene bradykinin receptor B2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005360391.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 2 homolog B
Names
Autophagy-related protein 2 like protein B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005360391.1 Reference ASM41265v1

    Range
    1042747..1116548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005868540.2 → XP_005868602.1  autophagy-related protein 2 homolog B isoform X1

    UniProtKB/TrEMBL
    S7MZX1
    Conserved Domains (3) summary
    pfam09333
    Location:1980 → 2074
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:11 → 105
    Chorein_N; N-terminal region of Chorein or VPS13
    pfam13329
    Location:1240 → 1360
    ATG2_CAD; Autophagy-related protein 2 CAD motif

  2. XM_014541482.1 → XP_014396968.1  autophagy-related protein 2 homolog B isoform X2

    UniProtKB/TrEMBL
    S7MZX1
    Conserved Domains (3) summary
    pfam09333
    Location:1918 → 2012
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:11 → 105
    Chorein_N; N-terminal region of Chorein or VPS13
    pfam13329
    Location:1178 → 1298
    ATG2_CAD; Autophagy-related protein 2 CAD motif
Nucleotide Protein
Heading Accession and Version

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