U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

VARS2 valyl-tRNA synthetase 2, mitochondrial [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102247228, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
VARS2
Gene description
valyl-tRNA synthetase 2, mitochondrial
Locus tag
D623_10004997
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005356477.1 (506028..523474)

NW_005356477.1Genomic Context describing neighboring genes Neighboring gene flotillin 1 Neighboring gene discoidin domain receptor tyrosine kinase 1 Neighboring gene uncharacterized LOC106725602 Neighboring gene uncharacterized LOC106725601 Neighboring gene surfactant associated 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005356477.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables valine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in valyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial
Names
Valyl-tRNA synthetase, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005356477.1 Reference ASM41265v1

    Range
    506028..523474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005863278.2 → XP_005863340.2  LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial

    UniProtKB/TrEMBL
    S7MNY1
    Conserved Domains (4) summary
    cd07962
    Location:1220 → 1354
    Anticodon_Ia_Val; Anticodon-binding domain of valyl tRNA synthetases
    cd00817
    Location:622 → 1220
    ValRS_core; catalytic core domain of valyl-tRNA synthetases
    PTZ00419
    Location:571 → 1511
    PTZ00419; valyl-tRNA synthetase-like protein; Provisional
    TIGR00625
    Location:19 → 461
    tfb2; Transcription factor tfb2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.