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SAMD8 sterile alpha motif domain containing 8 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102246106, updated on 30-Mar-2024

Summary

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Gene symbol
SAMD8
Gene description
sterile alpha motif domain containing 8
Locus tag
D623_10029132
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005357076.1 (3280359..3306957, complement)

NW_005357076.1Genomic Context describing neighboring genes Neighboring gene catechol-O-methyltransferase domain containing 1 Neighboring gene voltage dependent anion channel 2 Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene dual specificity phosphatase 13B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005357076.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii. Seim I, et al. Nat Commun, 2013. PMID 23962925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin synthase-related protein 1
Names
Sphingomyelin synthase-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005357076.1 Reference ASM41265v1

    Range
    3280359..3306957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005864649.2 → XP_005864711.1  sphingomyelin synthase-related protein 1

    See identical proteins and their annotated locations for XP_005864711.1

    UniProtKB/TrEMBL
    S7P944
    Conserved Domains (2) summary
    cd09515
    Location:9 → 77
    SAM_SGMS1-like; SAM domain of sphingomyelin synthase related subfamily
    pfam14360
    Location:292 → 365
    PAP2_C; PAP2 superfamily C-terminal
Nucleotide Protein
Heading Accession and Version

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