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SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102241541, updated on 30-Mar-2024

Summary

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Gene symbol
SPECC1L
Gene description
sperm antigen with calponin homology and coiled-coil domains 1 like
Locus tag
D623_10013083
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Also known as
Cytospin-A
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005372020.1 (1507441..1560800, complement)

NW_005372020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106724779 Neighboring gene adenosine A2a receptor Neighboring gene BCR activator of RhoGEF and GTPase Neighboring gene uncharacterized LOC106724782

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005372020.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of filamentous actin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytospin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005372020.1 Reference ASM41265v1

    Range
    1507441..1560800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005886298.2 → XP_005886360.1  cytospin-A isoform X1

    UniProtKB/TrEMBL
    S7NTR2
    Conserved Domains (3) summary
    cd00014
    Location:1016 → 1116
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cl09111
    Location:661 → 755
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl19219
    Location:626 → 703
    DUF342; Protein of unknown function (DUF342)

  2. XM_014533365.1 → XP_014388851.1  cytospin-A isoform X2

    UniProtKB/TrEMBL
    S7NTR2
    Conserved Domains (3) summary
    cd00014
    Location:967 → 1067
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cl09111
    Location:612 → 706
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl19219
    Location:577 → 654
    DUF342; Protein of unknown function (DUF342)

  3. XM_005886299.2 → XP_005886361.1  cytospin-A isoform X3

    UniProtKB/TrEMBL
    S7NTR2
    Conserved Domains (3) summary
    cd00014
    Location:955 → 1055
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cl09111
    Location:600 → 694
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
    cl19219
    Location:565 → 642
    DUF342; Protein of unknown function (DUF342)
Nucleotide Protein
Heading Accession and Version

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