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psmd5 proteasome 26S subunit, non-ATPase 5 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102234167, updated on 10-Mar-2024

Summary

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Gene symbol
psmd5
Gene description
proteasome 26S subunit, non-ATPase 5
See related
Ensembl:ENSXMAG00000005375
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See psmd5 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 8 NC_036450.1 (18948778..18954449, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372207.1 (1769748..1773536, complement)

Chromosome 8 - NC_036450.1Genomic Context describing neighboring genes Neighboring gene calmodulin regulated spectrin-associated protein 1a Neighboring gene potassium sodium-activated channel subfamily T member 1a Neighboring gene putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842 Neighboring gene collagen, type XXVII, alpha 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteasome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036450.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    18948778..18954449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005798665.3 → XP_005798722.1  26S proteasome non-ATPase regulatory subunit 5

    UniProtKB/TrEMBL
    M3ZT50
    Related
    ENSXMAP00000005393.1, ENSXMAT00000005399.2
    Conserved Domains (1) summary
    pfam10508
    Location:1 → 504
    Proteasom_PSMB; Proteasome non-ATPase 26S subunit
Nucleotide Protein Strain
Heading Accession and Version

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