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kif13b kinesin family member 13B [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102233541, updated on 22-Oct-2023

Summary

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Gene symbol
kif13b
Gene description
kinesin family member 13B
See related
Ensembl:ENSXMAG00000001804
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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Location:
chromosome: 15
Exon count:
43
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 15 NC_036457.1 (20631642..20668035)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372663.1 (232945..267838, complement)

Chromosome 15 - NC_036457.1Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein kinase pdik1l-B-like Neighboring gene elongator acetyltransferase complex subunit 3 Neighboring gene homeobox containing 1 b Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene dispatched homolog 1 (Drosophila)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIF13B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036457.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    20631642..20668035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023347601.1 → XP_023203369.1  kinesin-like protein KIF13B isoform X1

    UniProtKB/TrEMBL
    M3ZHX7
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1898 → 1961
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1637 → 1850
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  2. XM_023347599.1 → XP_023203367.1  kinesin-like protein KIF13B isoform X1

    UniProtKB/TrEMBL
    M3ZHX7
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1898 → 1961
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1637 → 1850
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  3. XM_023347603.1 → XP_023203371.1  kinesin-like protein KIF13B isoform X3

    UniProtKB/TrEMBL
    M3ZHX7
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1879 → 1942
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1618 → 1831
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  4. XM_023347602.1 → XP_023203370.1  kinesin-like protein KIF13B isoform X2

    UniProtKB/TrEMBL
    M3ZHX7
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1889 → 1952
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1628 → 1841
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  5. XM_023347606.1 → XP_023203374.1  kinesin-like protein KIF13B isoform X5

    UniProtKB/TrEMBL
    M3ZHX7
    Related
    ENSXMAP00000001819.2, ENSXMAT00000001823.2
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1870 → 1933
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1609 → 1822
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  6. XM_023347604.1 → XP_023203372.1  kinesin-like protein KIF13B isoform X4

    UniProtKB/TrEMBL
    M3ZHX7
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1879 → 1942
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1618 → 1831
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  7. XM_023347600.1 → XP_023203368.1  kinesin-like protein KIF13B isoform X1

    UniProtKB/TrEMBL
    M3ZHX7
    Conserved Domains (8) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam01302
    Location:1898 → 1961
    CAP_GLY; CAP-Gly domain
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam15717
    Location:1637 → 1850
    PCM1_C; Pericentriolar material 1 C terminus
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  8. XM_023347607.1 → XP_023203375.1  kinesin-like protein KIF13B isoform X6

    Conserved Domains (6) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)

  9. XM_023347608.1 → XP_023203376.1  kinesin-like protein KIF13B isoform X7

    Conserved Domains (6) summary
    cd00060
    Location:452 → 549
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:9 → 365
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam12423
    Location:768 → 813
    KIF1B; Kinesin protein 1B
    pfam12473
    Location:1215 → 1283
    DUF3694; Kinesin protein
    pfam16183
    Location:362 → 474
    Kinesin_assoc; Kinesin-associated
    cl23748
    Location:1096 → 1149
    DUF3585; Protein of unknown function (DUF3585)
Nucleotide Protein Strain
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