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ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102233509, updated on 10-Mar-2024

Summary

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Gene symbol
ikbkg
Gene description
inhibitor of nuclear factor kappa B kinase regulatory subunit gamma
See related
Ensembl:ENSXMAG00000004368
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 1 NC_036443.1 (5407524..5420697)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372303.1 (803701..815357)

Chromosome 1 - NC_036443.1Genomic Context describing neighboring genes Neighboring gene pyridoxal phosphate binding protein Neighboring gene transmembrane p24 trafficking protein 4 Neighboring gene selenophosphate synthetase 3 Neighboring gene adaptor related protein complex 4 subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of IkappaB kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NF-kappa-B essential modulator
Names
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
inhibitor of nuclear factor kappa B kinase subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036443.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    5407524..5420697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014470921.2 → XP_014326407.1  NF-kappa-B essential modulator isoform X1

    UniProtKB/TrEMBL
    M3ZQ85
    Related
    ENSXMAP00000004378.1, ENSXMAT00000004383.2
    Conserved Domains (3) summary
    cd09803
    Location:406 → 491
    UBAN; polyubiquitin binding domain of NEMO and related proteins
    pfam09798
    Location:276 → 412
    LCD1; DNA damage checkpoint protein
    pfam11577
    Location:28 → 95
    NEMO; NF-kappa-B essential modulator NEMO

  2. XM_023338452.1 → XP_023194220.1  NF-kappa-B essential modulator isoform X2

    UniProtKB/TrEMBL
    A0A3B5Q7L3
    Related
    ENSXMAP00000027090.1, ENSXMAT00000039474.1
    Conserved Domains (3) summary
    cd09803
    Location:390 → 475
    UBAN; polyubiquitin binding domain of NEMO and related proteins
    pfam11577
    Location:28 → 95
    NEMO; NF-kappa-B essential modulator NEMO
    cl25732
    Location:172 → 499
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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