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magi1b membrane associated guanylate kinase, WW and PDZ domain containing 1b [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102233100, updated on 10-Mar-2024

Summary

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Gene symbol
magi1b
Gene description
membrane associated guanylate kinase, WW and PDZ domain containing 1b
See related
Ensembl:ENSXMAG00000000336
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
magi1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
25
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 20 NC_036462.1 (28841537..28990211)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372673.1 (18387..82103)

Chromosome 20 - NC_036462.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeats and immunoglobulin-like domains 1 Neighboring gene solute carrier family 25 member 26 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 9 Neighboring gene uncharacterized LOC111612347 Neighboring gene prickle homolog 2b Neighboring gene SET domain-containing protein 5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1
Names
membrane associated guanylate kinase, WW and PDZ domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036462.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    28841537..28990211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023325657.1 → XP_023181425.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1

    Conserved Domains (8) summary
    smart00228
    Location:496 → 577
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1058 → 1153
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam08648
    Location:1430 → 1554
    DUF1777; Protein of unknown function (DUF1777)
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:756 → 864
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  2. XM_023325660.1 → XP_023181428.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A3B5PRB3
    Related
    ENSXMAP00000021445.1, ENSXMAT00000027002.1
    Conserved Domains (8) summary
    smart00228
    Location:496 → 577
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1058 → 1141
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam08648
    Location:1418 → 1542
    DUF1777; Protein of unknown function (DUF1777)
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:756 → 864
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  3. XM_023325658.1 → XP_023181426.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X2

    Conserved Domains (8) summary
    smart00228
    Location:496 → 577
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1056 → 1151
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam08648
    Location:1428 → 1552
    DUF1777; Protein of unknown function (DUF1777)
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:756 → 862
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  4. XM_023325661.1 → XP_023181429.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X5

    Conserved Domains (8) summary
    smart00228
    Location:496 → 577
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1043 → 1138
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam08648
    Location:1415 → 1539
    DUF1777; Protein of unknown function (DUF1777)
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:756 → 849
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  5. XM_023325659.1 → XP_023181427.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X3

    Conserved Domains (8) summary
    smart00228
    Location:490 → 571
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1052 → 1147
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam08648
    Location:1424 → 1548
    DUF1777; Protein of unknown function (DUF1777)
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:750 → 858
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

  6. XM_023325662.1 → XP_023181430.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A3B5QBK6, M3ZDQ4
    Related
    ENSXMAP00000000346.2, ENSXMAT00000000348.2
    Conserved Domains (8) summary
    smart00228
    Location:496 → 577
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1058 → 1153
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:756 → 864
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    cl28036
    Location:616 → 662
    Herpes_UL14; Herpesvirus UL14-like protein

  7. XM_023325665.1 → XP_023181433.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A3B5QBK6
    Related
    ENSXMAP00000029049.1, ENSXMAT00000041280.1
    Conserved Domains (8) summary
    smart00228
    Location:496 → 577
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1043 → 1138
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:756 → 849
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    cl28036
    Location:616 → 662
    Herpes_UL14; Herpesvirus UL14-like protein

  8. XM_023325663.1 → XP_023181431.1  membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A3B5QBK6
    Conserved Domains (8) summary
    smart00228
    Location:490 → 571
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:317 → 346
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:1052 → 1147
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:374 → 403
    WW; WW domain
    pfam16663
    Location:206 → 267
    MAGI_u1; Unstructured region on MAGI
    pfam16666
    Location:750 → 858
    MAGI_u5; Unstructured region on MAGI
    cl17190
    Location:117 → 191
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    cl28036
    Location:610 → 656
    Herpes_UL14; Herpesvirus UL14-like protein
Nucleotide Protein Strain
Heading Accession and Version

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