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cryaa crystallin, alpha A [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102230834, updated on 10-Mar-2024

Summary

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Gene symbol
cryaa
Gene description
crystallin, alpha A
See related
Ensembl:ENSXMAG00000026790
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 24 NC_036466.1 (5210466..5213071, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372383.1 (453489..455600)

Chromosome 24 - NC_036466.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 10-like Neighboring gene coiled-coil domain containing 14 Neighboring gene heat shock transcription factor 2 binding protein Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene cholinergic receptor, muscarinic 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-crystallin A chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036466.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    5210466..5213071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005807813.3 → XP_005807870.1  alpha-crystallin A chain

    UniProtKB/TrEMBL
    A0A3B5R4J0
    Related
    ENSXMAP00000038553.1, ENSXMAT00000036940.1
    Conserved Domains (2) summary
    cl00175
    Location:63 → 148
    alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
    pfam00525
    Location:1 → 51
    Crystallin; Alpha crystallin A chain, N terminal
Nucleotide Protein Strain
Heading Accession and Version

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