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dock1 dedicator of cytokinesis 1 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102229035, updated on 10-Mar-2024

Summary

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Gene symbol
dock1
Gene description
dedicator of cytokinesis 1
See related
Ensembl:ENSXMAG00000016344
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
53
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 10 NC_036452.1 (10832049..11052464, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372179.1 (3394361..3587505, complement)

Chromosome 10 - NC_036452.1Genomic Context describing neighboring genes Neighboring gene clarin 3 Neighboring gene forkhead box i1 Neighboring gene protein FAM196A Neighboring gene chromosome 10 C10orf90 homolog Neighboring gene disintegrin and metalloproteinase domain-containing protein 12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dedicator of cytokinesis protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036452.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    10832049..11052464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023340653.1 → XP_023196421.1  dedicator of cytokinesis protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A3B5Q5K5, M4APV2
    Related
    ENSXMAP00000027098.1, ENSXMAT00000030005.1
    Conserved Domains (5) summary
    cd08694
    Location:423 → 618
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam10214
    Location:1621 → 1768
    Rrn6; RNA polymerase I-specific transcription-initiation factor
    pfam16172
    Location:71 → 415
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1211 → 1610
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins

  2. XM_023340652.1 → XP_023196420.1  dedicator of cytokinesis protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3B5R740, M4APV2
    Related
    ENSXMAP00000039014.1, ENSXMAT00000033531.1
    Conserved Domains (5) summary
    cd08694
    Location:423 → 618
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam10214
    Location:1625 → 1772
    Rrn6; RNA polymerase I-specific transcription-initiation factor
    pfam16172
    Location:71 → 415
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1215 → 1614
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins

  3. XM_023340651.1 → XP_023196419.1  dedicator of cytokinesis protein 1 isoform X2

    UniProtKB/TrEMBL
    M4APV2
    Conserved Domains (5) summary
    cd08694
    Location:443 → 638
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam10214
    Location:1641 → 1788
    Rrn6; RNA polymerase I-specific transcription-initiation factor
    pfam16172
    Location:71 → 435
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1231 → 1630
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins

  4. XM_023340650.1 → XP_023196418.1  dedicator of cytokinesis protein 1 isoform X1

    UniProtKB/TrEMBL
    M4APV2
    Conserved Domains (5) summary
    cd08694
    Location:443 → 638
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam10214
    Location:1645 → 1792
    Rrn6; RNA polymerase I-specific transcription-initiation factor
    pfam16172
    Location:71 → 435
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1235 → 1634
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
Nucleotide Protein Strain
Heading Accession and Version

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