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acadsb acyl-CoA dehydrogenase short/branched chain [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102220838, updated on 16-Mar-2024

Summary

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Gene symbol
acadsb
Gene description
acyl-CoA dehydrogenase short/branched chain
See related
Ensembl:ENSXMAG00000016640
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See acadsb in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 10 NC_036452.1 (11693841..11698939, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372179.1 (4226923..4231951, complement)

Chromosome 10 - NC_036452.1Genomic Context describing neighboring genes Neighboring gene BUB3 mitotic checkpoint protein Neighboring gene H6 family homeobox 3 Neighboring gene IKAROS family zinc finger 5 Neighboring gene phosphoseryl-tRNA kinase Neighboring gene transmembrane protein 150A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036452.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    11693841..11698939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005794665.2 → XP_005794722.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    M4AQE1
    Related
    ENSXMAP00000016686.2, ENSXMAT00000016710.2
    Conserved Domains (1) summary
    cd01158
    Location:57 → 428
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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