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atp8b1 ATPase phospholipid transporting 8B1 [ Pundamilia nyererei ]

Gene ID: 102214566, updated on 10-Mar-2024

Summary

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Gene symbol
atp8b1
Gene description
ATPase phospholipid transporting 8B1
See related
Ensembl:ENSPNYG00000015427
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187417.1 (1299331..1335474)

NW_005187417.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102203028 Neighboring gene thioredoxin-like 1 Neighboring gene tripartite motif-containing protein 16-like Neighboring gene tripartite motif-containing protein 16-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187417.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid-transporting ATPase IC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187417.1 Reference PunNye1.0

    Range
    1299331..1335474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005725648.2 → XP_005725705.1  phospholipid-transporting ATPase IC

    UniProtKB/TrEMBL
    A0A3B4GC02, A0A9Y3QXD6
    Related
    ENSPNYP00000020440.1, ENSPNYT00000020942.1
    Conserved Domains (5) summary
    TIGR01652
    Location:87 → 1004
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    pfam00122
    Location:144 → 229
    E1-E2_ATPase; E1-E2 ATPase
    pfam16209
    Location:60 → 138
    PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
    pfam16212
    Location:743 → 997
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cl21460
    Location:700 → 743
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

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