U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

homer1 homer scaffold protein 1 [ Pundamilia nyererei ]

Gene ID: 102214533, updated on 31-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
homer1
Gene description
homer scaffold protein 1
See related
Ensembl:ENSPNYG00000006531
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See homer1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187403.1 (2133985..2157202, complement)

NW_005187403.1Genomic Context describing neighboring genes Neighboring gene betaine--homocysteine S-methyltransferase 1-like Neighboring gene junction mediating and regulatory protein, p53 cofactor Neighboring gene cardiomyopathy associated 5 Neighboring gene DTW domain containing 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005187403.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled glutamate receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled glutamate receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of store-operated calcium entry IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
homer protein homolog 1
Names
homer scaffolding protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187403.1 Reference PunNye1.0

    Range
    2133985..2157202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005720119.1 → XP_005720176.1  homer protein homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4FD92, A0A9Y3QTD6
    Related
    ENSPNYP00000008560.1, ENSPNYT00000008765.1
    Conserved Domains (3) summary
    cd01206
    Location:7 → 115
    EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain
    cl19252
    Location:283 → 357
    MreC; rod shape-determining protein MreC
    cl24005
    Location:244 → 297
    DUF2570; Protein of unknown function (DUF2570)

  2. XM_005720118.2 → XP_005720175.1  homer protein homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4FD92, A0A9Y3QRQ5
    Conserved Domains (3) summary
    cd01206
    Location:3 → 111
    EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain
    cl19252
    Location:297 → 371
    MreC; rod shape-determining protein MreC
    cl24005
    Location:258 → 311
    DUF2570; Protein of unknown function (DUF2570)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.