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dock1 dedicator of cytokinesis 1 [ Pundamilia nyererei ]

Gene ID: 102213201, updated on 10-Mar-2024

Summary

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Gene symbol
dock1
Gene description
dedicator of cytokinesis 1
See related
Ensembl:ENSPNYG00000002157
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
53
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187470.1 (2436122..2631384)

NW_005187470.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 12 Neighboring gene chromosome unknown C10orf90 homolog Neighboring gene inhibitory synaptic factor 2A Neighboring gene forkhead box i1 Neighboring gene clarin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187470.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dedicator of cytokinesis protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187470.1 Reference PunNye1.0

    Range
    2436122..2631384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005736499.2 → XP_005736556.1  dedicator of cytokinesis protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4EZ79, A0A9Y3VMR6
    Conserved Domains (4) summary
    cd08694
    Location:443 → 638
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam16172
    Location:71 → 435
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1235 → 1634
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins

  2. XM_013911671.1 → XP_013767125.1  dedicator of cytokinesis protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4EZ79, A0A9Y6JGE9
    Conserved Domains (4) summary
    cd08694
    Location:443 → 638
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam16172
    Location:71 → 435
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1231 → 1630
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins

  3. XM_013911672.1 → XP_013767126.1  dedicator of cytokinesis protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3B4EZ11, A0A3B4EZ79
    Related
    ENSPNYP00000002943.1, ENSPNYT00000003022.1
    Conserved Domains (4) summary
    cd08694
    Location:423 → 618
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam16172
    Location:71 → 415
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1215 → 1614
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins

  4. XM_005736500.2 → XP_005736557.1  dedicator of cytokinesis protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A3B4EZ79, A0A3B4F028
    Related
    ENSPNYP00000002969.1, ENSPNYT00000003050.1
    Conserved Domains (4) summary
    cd08694
    Location:423 → 618
    C2_Dock-A; C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins
    cd12051
    Location:12 → 67
    SH3_DOCK1_5_A; Src Homology 3 domain of Class A Dedicator of Cytokinesis proteins 1 and 5
    pfam16172
    Location:71 → 415
    DOCK_N; DOCK N-terminus
    cl06123
    Location:1211 → 1610
    DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
Nucleotide Protein
Heading Accession and Version

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