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matn2 matrilin 2 [ Pundamilia nyererei ]

Gene ID: 102209781, updated on 31-Jan-2024

Summary

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Gene symbol
matn2
Gene description
matrilin 2
See related
Ensembl:ENSPNYG00000004311
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187526.1 (132158..140834)

NW_005187526.1Genomic Context describing neighboring genes Neighboring gene protein LYRIC-like Neighboring gene lysosomal protein transmembrane 4 beta Neighboring gene predicted GPI-anchored protein 58 Neighboring gene ribonuclease UK114-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187526.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187526.1 Reference PunNye1.0

    Range
    132158..140834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005742973.1 → XP_005743030.1  matrilin-2

    UniProtKB/TrEMBL
    A0A3B4F7S8, A0A9Y3VQ80
    Related
    ENSPNYP00000005694.1, ENSPNYT00000005841.1
    Conserved Domains (3) summary
    pfam14670
    Location:284 → 319
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:55 → 277
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl22855
    Location:374 → 502
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
Nucleotide Protein
Heading Accession and Version

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