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galnt15 polypeptide N-acetylgalactosaminyltransferase 15 [ Pundamilia nyererei ]

Gene ID: 102209157, updated on 31-Jan-2024

Summary

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Gene symbol
galnt15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
Ensembl:ENSPNYG00000020254
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187431.1 (854550..859086)

NW_005187431.1Genomic Context describing neighboring genes Neighboring gene insulin-like growth factor 2 mRNA binding protein 3 Neighboring gene glycoprotein (transmembrane) nmb Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 8 Neighboring gene SATB homeobox 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187431.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187431.1 Reference PunNye1.0

    Range
    854550..859086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005728769.2 → XP_005728826.1  polypeptide N-acetylgalactosaminyltransferase 15

    UniProtKB/TrEMBL
    A0A3B4GV74, A0A9Y3VGM7
    Related
    ENSPNYP00000026900.1, ENSPNYT00000027560.1
    Conserved Domains (4) summary
    cd02510
    Location:188 → 487
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:501 → 629
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:500 → 627
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:185 → 412
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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Gene LinkOut

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